Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CLCN2P51788 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CLCN2P51788 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CLCN2P51788 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CLCN2P51788 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.37□□□□□ -0.11
CLCN2P51788 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CLCN2P51788 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCN2P51788 GAPDHP40-201ENST00000505218 1006 ntBASIC14.37□□□□□ -0.11
CLCN2P51788 TDH-203ENST00000531764 1110 ntBASIC14.37□□□□□ -0.11
CLCN2P51788 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.37□□□□□ -0.11
CLCN2P51788 PTP4A1P2-201ENST00000546033 454 ntBASIC14.37□□□□□ -0.11
CLCN2P51788 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.37□□□□□ -0.11
CLCN2P51788 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.37□□□□□ -0.11
CLCN2P51788 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CLCN2P51788 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.37□□□□□ -0.11
CLCN2P51788 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.37□□□□□ -0.11
CLCN2P51788 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCN2P51788 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.37□□□□□ -0.11
CLCN2P51788 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCN2P51788 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CLCN2P51788 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLCN2P51788 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CLCN2P51788 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCN2P51788 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 REXO1L4P-201ENST00000605109 1937 ntBASIC14.37□□□□□ -0.11
CLCN2P51788 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCN2P51788 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 BEND3P3-201ENST00000611030 2440 ntBASIC14.36□□□□□ -0.11
CLCN2P51788 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 TCAM1P-207ENST00000485295 1537 ntBASIC14.36□□□□□ -0.11
CLCN2P51788 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCN2P51788 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCN2P51788 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.36□□□□□ -0.11
CLCN2P51788 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCN2P51788 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CLCN2P51788 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCN2P51788 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CLCN2P51788 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCN2P51788 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCN2P51788 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CLCN2P51788 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.36□□□□□ -0.11
CLCN2P51788 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCN2P51788 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLCN2P51788 AP001063.1-201ENST00000568332 529 ntBASIC14.36□□□□□ -0.11
CLCN2P51788 AC106886.1-201ENST00000568660 600 ntBASIC14.36□□□□□ -0.11
CLCN2P51788 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.36□□□□□ -0.11
CLCN2P51788 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCN2P51788 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.36□□□□□ -0.11
CLCN2P51788 AL138799.1-201ENST00000448213 1675 ntBASIC14.36□□□□□ -0.11
CLCN2P51788 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCN2P51788 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.36□□□□□ -0.11
CLCN2P51788 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCN2P51788 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.36□□□□□ -0.11
CLCN2P51788 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLCN2P51788 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCN2P51788 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.35□□□□□ -0.11
CLCN2P51788 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLCN2P51788 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCN2P51788 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCN2P51788 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCN2P51788 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCN2P51788 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCN2P51788 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCN2P51788 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms