Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC090164.2-201ENST00000611487 516 ntBASIC16.59■□□□□ 0.25
USP11P51784 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
USP11P51784 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 AC020907.1-201ENST00000616460 1350 ntBASIC16.59■□□□□ 0.25
USP11P51784 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.59■□□□□ 0.25
USP11P51784 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 CYP4F23P-201ENST00000593402 1579 ntBASIC16.59■□□□□ 0.25
USP11P51784 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USP11P51784 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
USP11P51784 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
USP11P51784 AC007686.3-201ENST00000619017 3487 ntBASIC16.58■□□□□ 0.25
USP11P51784 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
USP11P51784 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
USP11P51784 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP11P51784 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
USP11P51784 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.58■□□□□ 0.24
USP11P51784 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.58■□□□□ 0.24
USP11P51784 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.58■□□□□ 0.24
USP11P51784 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP11P51784 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.58■□□□□ 0.24
USP11P51784 NKAIN1P1-201ENST00000435754 582 ntBASIC16.58■□□□□ 0.24
USP11P51784 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.58■□□□□ 0.24
USP11P51784 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.58■□□□□ 0.24
USP11P51784 ST13P19-201ENST00000442505 1124 ntBASIC16.58■□□□□ 0.24
USP11P51784 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP11P51784 AC091804.1-201ENST00000486888 567 ntBASIC16.58■□□□□ 0.24
USP11P51784 AC106794.1-201ENST00000506935 792 ntBASIC16.58■□□□□ 0.24
USP11P51784 AC044849.1-201ENST00000519737 1188 ntBASIC16.58■□□□□ 0.24
USP11P51784 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP11P51784 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.58■□□□□ 0.24
USP11P51784 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.58■□□□□ 0.24
USP11P51784 AC005586.2-201ENST00000563946 837 ntBASIC16.58■□□□□ 0.24
USP11P51784 AC008805.1-201ENST00000590892 364 ntBASIC16.58■□□□□ 0.24
USP11P51784 AC133540.1-201ENST00000620845 1019 ntBASIC16.58■□□□□ 0.24
USP11P51784 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
USP11P51784 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP11P51784 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.58■□□□□ 0.24
USP11P51784 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.58■□□□□ 0.24
USP11P51784 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
USP11P51784 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP11P51784 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP11P51784 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
USP11P51784 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP11P51784 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.58■□□□□ 0.24
USP11P51784 AC136759.1-202ENST00000530858 2194 ntBASIC16.58■□□□□ 0.24
USP11P51784 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.58■□□□□ 0.24
USP11P51784 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP11P51784 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
USP11P51784 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
USP11P51784 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP11P51784 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP11P51784 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP11P51784 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.57■□□□□ 0.24
USP11P51784 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
USP11P51784 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
USP11P51784 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.57■□□□□ 0.24
USP11P51784 AC097359.2-201ENST00000604992 2389 ntBASIC16.57■□□□□ 0.24
USP11P51784 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
USP11P51784 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.57■□□□□ 0.24
USP11P51784 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
USP11P51784 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP11P51784 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
USP11P51784 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
USP11P51784 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP11P51784 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
USP11P51784 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
USP11P51784 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP11P51784 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
USP11P51784 MIR1247-201ENST00000408206 136 ntBASIC16.57■□□□□ 0.24
USP11P51784 GPAA1P2-201ENST00000417923 928 ntBASIC16.57■□□□□ 0.24
USP11P51784 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.57■□□□□ 0.24
USP11P51784 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.57■□□□□ 0.24
USP11P51784 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.57■□□□□ 0.24
USP11P51784 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.57■□□□□ 0.24
USP11P51784 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.57■□□□□ 0.24
USP11P51784 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.57■□□□□ 0.24
USP11P51784 MIR4525-201ENST00000580000 75 ntBASIC16.57■□□□□ 0.24
USP11P51784 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.57■□□□□ 0.24
USP11P51784 AC243960.2-201ENST00000600996 747 ntBASIC16.57■□□□□ 0.24
USP11P51784 AC063926.3-201ENST00000624734 5658 ntBASIC16.57■□□□□ 0.24
USP11P51784 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP11P51784 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.57■□□□□ 0.24
USP11P51784 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP11P51784 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP11P51784 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP11P51784 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms