Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.37□□□□□ -0.11
IDH3AP50213 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
IDH3AP50213 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
IDH3AP50213 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
IDH3AP50213 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.37□□□□□ -0.11
IDH3AP50213 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
IDH3AP50213 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.37□□□□□ -0.11
IDH3AP50213 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
IDH3AP50213 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.37□□□□□ -0.11
IDH3AP50213 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.37□□□□□ -0.11
IDH3AP50213 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.37□□□□□ -0.11
IDH3AP50213 AL671883.3-201ENST00000603274 991 ntBASIC14.37□□□□□ -0.11
IDH3AP50213 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.37□□□□□ -0.11
IDH3AP50213 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
IDH3AP50213 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.37□□□□□ -0.11
IDH3AP50213 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.37□□□□□ -0.11
IDH3AP50213 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
IDH3AP50213 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.37□□□□□ -0.11
IDH3AP50213 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IDH3AP50213 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
IDH3AP50213 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
IDH3AP50213 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
IDH3AP50213 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
IDH3AP50213 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
IDH3AP50213 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
IDH3AP50213 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
IDH3AP50213 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.36□□□□□ -0.11
IDH3AP50213 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.36□□□□□ -0.11
IDH3AP50213 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
IDH3AP50213 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.36□□□□□ -0.11
IDH3AP50213 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
IDH3AP50213 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 HLA-J-203ENST00000494367 1087 ntBASIC14.36□□□□□ -0.11
IDH3AP50213 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.36□□□□□ -0.11
IDH3AP50213 SPDYE18-201ENST00000510091 1050 ntBASIC14.36□□□□□ -0.11
IDH3AP50213 AC069120.2-201ENST00000524091 540 ntBASIC14.36□□□□□ -0.11
IDH3AP50213 AC036164.1-201ENST00000570544 333 ntBASIC14.36□□□□□ -0.11
IDH3AP50213 MIR3687-2-201ENST00000577708 61 ntBASIC14.36□□□□□ -0.11
IDH3AP50213 AC010327.4-202ENST00000591484 748 ntBASIC14.36□□□□□ -0.11
IDH3AP50213 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.36□□□□□ -0.11
IDH3AP50213 MIR3687-1-201ENST00000614492 61 ntBASIC14.36□□□□□ -0.11
IDH3AP50213 Z92544.3-201ENST00000624747 417 ntBASIC14.36□□□□□ -0.11
IDH3AP50213 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
IDH3AP50213 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.36□□□□□ -0.11
IDH3AP50213 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 AC007326.2-201ENST00000624224 7579 ntBASIC14.36□□□□□ -0.11
IDH3AP50213 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
IDH3AP50213 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.36□□□□□ -0.11
IDH3AP50213 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.36□□□□□ -0.11
IDH3AP50213 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IDH3AP50213 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IDH3AP50213 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IDH3AP50213 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IDH3AP50213 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
IDH3AP50213 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.35□□□□□ -0.11
IDH3AP50213 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IDH3AP50213 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IDH3AP50213 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
IDH3AP50213 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
IDH3AP50213 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
IDH3AP50213 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
IDH3AP50213 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms