Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MRE11P49959 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.31■□□□□ 0.36
MRE11P49959 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.31■□□□□ 0.36
MRE11P49959 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
MRE11P49959 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC17.31■□□□□ 0.36
MRE11P49959 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MRE11P49959 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 AC079140.1-201ENST00000508039 487 ntBASIC17.31■□□□□ 0.36
MRE11P49959 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MRE11P49959 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
MRE11P49959 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MRE11P49959 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.31■□□□□ 0.36
MRE11P49959 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.31■□□□□ 0.36
MRE11P49959 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.31■□□□□ 0.36
MRE11P49959 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.31■□□□□ 0.36
MRE11P49959 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRE11P49959 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.3■□□□□ 0.36
MRE11P49959 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
MRE11P49959 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.3■□□□□ 0.36
MRE11P49959 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MRE11P49959 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
MRE11P49959 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.3■□□□□ 0.36
MRE11P49959 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.3■□□□□ 0.36
MRE11P49959 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC17.3■□□□□ 0.36
MRE11P49959 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.3■□□□□ 0.36
MRE11P49959 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
MRE11P49959 AC092580.3-201ENST00000430932 139 ntBASIC17.3■□□□□ 0.36
MRE11P49959 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.3■□□□□ 0.36
MRE11P49959 CYP4F24P-201ENST00000586049 1580 ntBASIC17.3■□□□□ 0.36
MRE11P49959 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.3■□□□□ 0.36
MRE11P49959 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.3■□□□□ 0.36
MRE11P49959 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC17.3■□□□□ 0.36
MRE11P49959 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MRE11P49959 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
MRE11P49959 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.3■□□□□ 0.36
MRE11P49959 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC17.3■□□□□ 0.36
MRE11P49959 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRE11P49959 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MRE11P49959 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
MRE11P49959 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC17.29■□□□□ 0.36
MRE11P49959 STK40-201ENST00000359297 4837 ntTSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MRE11P49959 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MRE11P49959 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 AL512384.1-201ENST00000406683 331 ntBASIC17.29■□□□□ 0.36
MRE11P49959 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MRE11P49959 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.29■□□□□ 0.36
MRE11P49959 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.29■□□□□ 0.36
MRE11P49959 CXCL1P1-201ENST00000502804 216 ntBASIC17.29■□□□□ 0.36
MRE11P49959 AC098859.1-201ENST00000502915 1238 ntBASIC17.29■□□□□ 0.36
MRE11P49959 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.29■□□□□ 0.36
MRE11P49959 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms