Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.82■□□□□ 0.12
SSR1P43307 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.82■□□□□ 0.12
SSR1P43307 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SSR1P43307 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SSR1P43307 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.82■□□□□ 0.12
SSR1P43307 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.82■□□□□ 0.12
SSR1P43307 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SSR1P43307 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SSR1P43307 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SSR1P43307 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SSR1P43307 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SSR1P43307 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.81■□□□□ 0.12
SSR1P43307 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.81■□□□□ 0.12
SSR1P43307 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC15.81■□□□□ 0.12
SSR1P43307 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 KRT8P14-201ENST00000414254 1442 ntBASIC15.81■□□□□ 0.12
SSR1P43307 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.81■□□□□ 0.12
SSR1P43307 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.81■□□□□ 0.12
SSR1P43307 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.81■□□□□ 0.12
SSR1P43307 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SSR1P43307 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.81■□□□□ 0.12
SSR1P43307 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.81■□□□□ 0.12
SSR1P43307 AC022616.1-201ENST00000518688 554 ntBASIC15.81■□□□□ 0.12
SSR1P43307 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.81■□□□□ 0.12
SSR1P43307 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 AC005840.4-201ENST00000541242 2494 ntBASIC15.81■□□□□ 0.12
SSR1P43307 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.81■□□□□ 0.12
SSR1P43307 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
SSR1P43307 AC124283.3-201ENST00000570869 594 ntBASIC15.81■□□□□ 0.12
SSR1P43307 AC055811.4-201ENST00000624039 1754 ntBASIC15.81■□□□□ 0.12
SSR1P43307 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.81■□□□□ 0.12
SSR1P43307 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SSR1P43307 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.81■□□□□ 0.12
SSR1P43307 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.81■□□□□ 0.12
SSR1P43307 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSR1P43307 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.81■□□□□ 0.12
SSR1P43307 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SSR1P43307 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SSR1P43307 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 AL391825.1-201ENST00000457671 1364 ntBASIC15.8■□□□□ 0.12
SSR1P43307 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SSR1P43307 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SSR1P43307 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.8■□□□□ 0.12
SSR1P43307 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms