Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.93□□□□□ -0.34
GDNFP39905 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.93□□□□□ -0.34
GDNFP39905 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.93□□□□□ -0.34
GDNFP39905 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.93□□□□□ -0.34
GDNFP39905 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.93□□□□□ -0.34
GDNFP39905 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GDNFP39905 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.93□□□□□ -0.34
GDNFP39905 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.93□□□□□ -0.34
GDNFP39905 AC005498.2-205ENST00000593218 784 ntBASIC12.93□□□□□ -0.34
GDNFP39905 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
GDNFP39905 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
GDNFP39905 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GDNFP39905 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.93□□□□□ -0.34
GDNFP39905 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.93□□□□□ -0.34
GDNFP39905 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
GDNFP39905 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
GDNFP39905 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
GDNFP39905 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
GDNFP39905 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.92□□□□□ -0.34
GDNFP39905 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.92□□□□□ -0.34
GDNFP39905 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
GDNFP39905 AL133267.1-201ENST00000398220 340 ntBASIC12.92□□□□□ -0.34
GDNFP39905 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 AC241585.1-201ENST00000433527 519 ntBASIC12.92□□□□□ -0.34
GDNFP39905 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.92□□□□□ -0.34
GDNFP39905 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.92□□□□□ -0.34
GDNFP39905 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
GDNFP39905 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.92□□□□□ -0.34
GDNFP39905 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.92□□□□□ -0.34
GDNFP39905 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.92□□□□□ -0.34
GDNFP39905 AC111170.3-201ENST00000624282 2464 ntBASIC12.92□□□□□ -0.34
GDNFP39905 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
GDNFP39905 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 AC004899.2-201ENST00000622993 3860 ntBASIC12.92□□□□□ -0.34
GDNFP39905 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.92□□□□□ -0.34
GDNFP39905 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.92□□□□□ -0.34
GDNFP39905 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.92□□□□□ -0.34
GDNFP39905 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.92□□□□□ -0.34
GDNFP39905 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.92□□□□□ -0.34
GDNFP39905 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GDNFP39905 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms