Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 AGAP10P-201ENST00000454844 2418 ntBASIC14.4□□□□□ -0.1
EPHA3P29320 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
EPHA3P29320 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.4□□□□□ -0.1
EPHA3P29320 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.4□□□□□ -0.1
EPHA3P29320 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.4□□□□□ -0.1
EPHA3P29320 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 AC025678.2-201ENST00000562061 970 ntBASIC14.4□□□□□ -0.1
EPHA3P29320 RARRES2P5-201ENST00000564013 466 ntBASIC14.4□□□□□ -0.1
EPHA3P29320 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.4□□□□□ -0.1
EPHA3P29320 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
EPHA3P29320 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 AL157996.1-201ENST00000624684 2299 ntBASIC14.4□□□□□ -0.1
EPHA3P29320 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
EPHA3P29320 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA3P29320 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA3P29320 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
EPHA3P29320 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.39□□□□□ -0.11
EPHA3P29320 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 RNU1-114P-201ENST00000365297 166 ntBASIC14.39□□□□□ -0.11
EPHA3P29320 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.39□□□□□ -0.11
EPHA3P29320 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.39□□□□□ -0.11
EPHA3P29320 RN7SL399P-201ENST00000471648 279 ntBASIC14.39□□□□□ -0.11
EPHA3P29320 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.39□□□□□ -0.11
EPHA3P29320 AC135586.1-201ENST00000539323 574 ntBASIC14.39□□□□□ -0.11
EPHA3P29320 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 AC004449.1-201ENST00000564240 433 ntBASIC14.39□□□□□ -0.11
EPHA3P29320 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
EPHA3P29320 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 AC015911.4-201ENST00000588022 1070 ntBASIC14.39□□□□□ -0.11
EPHA3P29320 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 MIR6074-201ENST00000612054 107 ntBASIC14.39□□□□□ -0.11
EPHA3P29320 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
EPHA3P29320 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms