Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CHMLP26374 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHMLP26374 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMLP26374 AL161932.2-201ENST00000435436 679 ntBASIC17.72■□□□□ 0.43
CHMLP26374 AL355994.2-201ENST00000447882 704 ntBASIC17.72■□□□□ 0.43
CHMLP26374 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.72■□□□□ 0.43
CHMLP26374 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.72■□□□□ 0.43
CHMLP26374 KRT17P8-201ENST00000540749 863 ntBASIC17.72■□□□□ 0.43
CHMLP26374 MIR4783-201ENST00000580343 82 ntBASIC17.72■□□□□ 0.43
CHMLP26374 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMLP26374 AL136301.1-201ENST00000615830 422 ntBASIC17.72■□□□□ 0.43
CHMLP26374 AL162274.1-201ENST00000617191 1098 ntBASIC17.72■□□□□ 0.43
CHMLP26374 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHMLP26374 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMLP26374 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHMLP26374 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CHMLP26374 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 AC064801.2-201ENST00000625052 1303 ntBASIC17.72■□□□□ 0.43
CHMLP26374 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMLP26374 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHMLP26374 KRT8P24-201ENST00000560290 1559 ntBASIC17.71■□□□□ 0.43
CHMLP26374 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMLP26374 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHMLP26374 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.71■□□□□ 0.43
CHMLP26374 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.71■□□□□ 0.43
CHMLP26374 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHMLP26374 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.71■□□□□ 0.43
CHMLP26374 AL035414.1-201ENST00000451327 857 ntBASIC17.71■□□□□ 0.43
CHMLP26374 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.71■□□□□ 0.43
CHMLP26374 CTBP2P5-201ENST00000454986 1264 ntBASIC17.71■□□□□ 0.43
CHMLP26374 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 SNX29P1-201ENST00000548357 1007 ntBASIC17.71■□□□□ 0.43
CHMLP26374 AP006547.1-201ENST00000563435 692 ntBASIC17.71■□□□□ 0.43
CHMLP26374 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.71■□□□□ 0.43
CHMLP26374 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMLP26374 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHMLP26374 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHMLP26374 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMLP26374 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMLP26374 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMLP26374 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
CHMLP26374 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHMLP26374 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.71■□□□□ 0.42
CHMLP26374 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHMLP26374 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHMLP26374 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CHMLP26374 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMLP26374 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMLP26374 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CHMLP26374 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMLP26374 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMLP26374 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CHMLP26374 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHMLP26374 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHMLP26374 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 MIR326-201ENST00000362220 95 ntBASIC17.7■□□□□ 0.42
CHMLP26374 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CHMLP26374 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.7■□□□□ 0.42
CHMLP26374 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.7■□□□□ 0.42
CHMLP26374 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMLP26374 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMLP26374 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.7■□□□□ 0.42
CHMLP26374 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMLP26374 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms