Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL606495.2-201ENST00000605867 535 ntBASIC12.47□□□□□ -0.41
COL8A2P25067 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
COL8A2P25067 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.47□□□□□ -0.41
COL8A2P25067 AC138649.2-201ENST00000615886 705 ntBASIC12.47□□□□□ -0.41
COL8A2P25067 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 AC244394.1-201ENST00000435000 1665 ntBASIC12.47□□□□□ -0.41
COL8A2P25067 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
COL8A2P25067 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.47□□□□□ -0.41
COL8A2P25067 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.46□□□□□ -0.41
COL8A2P25067 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.46□□□□□ -0.41
COL8A2P25067 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.46□□□□□ -0.41
COL8A2P25067 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
COL8A2P25067 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 TUBBP5-203ENST00000508529 1334 ntBASIC12.46□□□□□ -0.41
COL8A2P25067 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
COL8A2P25067 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 CYP46A4P-201ENST00000414953 267 ntBASIC12.46□□□□□ -0.41
COL8A2P25067 SLC25A24P2-201ENST00000415059 510 ntBASIC12.46□□□□□ -0.41
COL8A2P25067 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.46□□□□□ -0.41
COL8A2P25067 IGHJ2P-201ENST00000454480 60 ntBASIC12.46□□□□□ -0.41
COL8A2P25067 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 ALG3P1-201ENST00000508806 1114 ntBASIC12.46□□□□□ -0.41
COL8A2P25067 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
COL8A2P25067 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 AC132192.2-201ENST00000596206 1147 ntBASIC12.46□□□□□ -0.41
COL8A2P25067 NDUFV2P1-201ENST00000596415 907 ntBASIC12.46□□□□□ -0.41
COL8A2P25067 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.46□□□□□ -0.41
COL8A2P25067 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
COL8A2P25067 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
COL8A2P25067 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COL8A2P25067 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.46□□□□□ -0.42
COL8A2P25067 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
COL8A2P25067 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
COL8A2P25067 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
COL8A2P25067 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
COL8A2P25067 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.46□□□□□ -0.42
COL8A2P25067 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
COL8A2P25067 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
COL8A2P25067 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
COL8A2P25067 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
COL8A2P25067 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
COL8A2P25067 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
COL8A2P25067 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
COL8A2P25067 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
COL8A2P25067 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
COL8A2P25067 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms