Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.39□□□□□ -0.59
RAB4AP20338 RPL5P21-201ENST00000404620 815 ntBASIC11.39□□□□□ -0.59
RAB4AP20338 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.39□□□□□ -0.59
RAB4AP20338 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
RAB4AP20338 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
RAB4AP20338 AC108073.2-201ENST00000464002 357 ntBASIC11.39□□□□□ -0.59
RAB4AP20338 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 PRYP6-201ENST00000514804 343 ntBASIC11.39□□□□□ -0.59
RAB4AP20338 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
RAB4AP20338 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.39□□□□□ -0.59
RAB4AP20338 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.39□□□□□ -0.59
RAB4AP20338 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.39□□□□□ -0.59
RAB4AP20338 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.39□□□□□ -0.59
RAB4AP20338 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.39□□□□□ -0.59
RAB4AP20338 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
RAB4AP20338 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.39□□□□□ -0.59
RAB4AP20338 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RAB4AP20338 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RAB4AP20338 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.39□□□□□ -0.59
RAB4AP20338 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
RAB4AP20338 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.38□□□□□ -0.59
RAB4AP20338 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
RAB4AP20338 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.38□□□□□ -0.59
RAB4AP20338 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
RAB4AP20338 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 AL445209.1-201ENST00000607269 3491 ntBASIC11.38□□□□□ -0.59
RAB4AP20338 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
RAB4AP20338 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.38□□□□□ -0.59
RAB4AP20338 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
RAB4AP20338 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
RAB4AP20338 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.38□□□□□ -0.59
RAB4AP20338 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.38□□□□□ -0.59
RAB4AP20338 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.38□□□□□ -0.59
RAB4AP20338 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.38□□□□□ -0.59
RAB4AP20338 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 AC024267.1-201ENST00000582320 895 ntBASIC11.38□□□□□ -0.59
RAB4AP20338 AC011467.4-201ENST00000594891 528 ntBASIC11.38□□□□□ -0.59
RAB4AP20338 AL356488.2-201ENST00000602755 427 ntBASIC11.38□□□□□ -0.59
RAB4AP20338 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms