Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
KRT4P19013 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT4P19013 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT4P19013 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT4P19013 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.86□□□□□ -0.03
KRT4P19013 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT4P19013 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KRT4P19013 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.86□□□□□ -0.03
KRT4P19013 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
KRT4P19013 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT4P19013 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT4P19013 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT4P19013 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
KRT4P19013 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KRT4P19013 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
KRT4P19013 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
KRT4P19013 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 AC015688.4-201ENST00000580780 1647 ntBASIC14.85□□□□□ -0.03
KRT4P19013 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 AC015909.5-201ENST00000624336 2266 ntBASIC14.85□□□□□ -0.03
KRT4P19013 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
KRT4P19013 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.85□□□□□ -0.03
KRT4P19013 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 AC007969.1-201ENST00000433675 447 ntBASIC14.85□□□□□ -0.03
KRT4P19013 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.85□□□□□ -0.03
KRT4P19013 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.85□□□□□ -0.03
KRT4P19013 AL049840.4-201ENST00000602422 811 ntBASIC14.85□□□□□ -0.03
KRT4P19013 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.85□□□□□ -0.03
KRT4P19013 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.85□□□□□ -0.03
KRT4P19013 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 AGAP10P-201ENST00000454844 2418 ntBASIC14.85□□□□□ -0.03
KRT4P19013 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
KRT4P19013 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.85□□□□□ -0.03
KRT4P19013 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
KRT4P19013 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
KRT4P19013 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.85□□□□□ -0.03
KRT4P19013 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
KRT4P19013 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 AL157996.1-201ENST00000624684 2299 ntBASIC14.85□□□□□ -0.03
KRT4P19013 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KRT4P19013 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KRT4P19013 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KRT4P19013 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT4P19013 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KRT4P19013 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT4P19013 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT4P19013 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT4P19013 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT4P19013 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT4P19013 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
KRT4P19013 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
KRT4P19013 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT4P19013 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KRT4P19013 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT4P19013 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT4P19013 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT4P19013 AC003102.2-201ENST00000589195 1469 ntBASIC14.84□□□□□ -0.03
KRT4P19013 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.84□□□□□ -0.03
KRT4P19013 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT4P19013 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KRT4P19013 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
KRT4P19013 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KRT4P19013 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.84□□□□□ -0.03
KRT4P19013 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.84□□□□□ -0.03
KRT4P19013 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
KRT4P19013 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
KRT4P19013 KLF2P3-201ENST00000451977 1087 ntBASIC14.84□□□□□ -0.03
KRT4P19013 AL589987.1-201ENST00000453380 819 ntBASIC14.84□□□□□ -0.03
KRT4P19013 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.84□□□□□ -0.03
KRT4P19013 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
KRT4P19013 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
KRT4P19013 AC036164.1-201ENST00000570544 333 ntBASIC14.84□□□□□ -0.03
KRT4P19013 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms