Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CDH1P12830 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDH1P12830 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.44□□□□□ -0.1
CDH1P12830 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH1P12830 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CDH1P12830 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH1P12830 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CDH1P12830 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CDH1P12830 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH1P12830 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH1P12830 KRT90P-201ENST00000549264 1064 ntBASIC14.44□□□□□ -0.1
CDH1P12830 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH1P12830 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH1P12830 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH1P12830 AC138466.3-201ENST00000619983 221 ntBASIC14.44□□□□□ -0.1
CDH1P12830 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH1P12830 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDH1P12830 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CDH1P12830 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDH1P12830 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH1P12830 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH1P12830 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH1P12830 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDH1P12830 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH1P12830 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 AC011840.2-201ENST00000563063 1520 ntBASIC14.43□□□□□ -0.1
CDH1P12830 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
CDH1P12830 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH1P12830 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH1P12830 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH1P12830 MESTP3-201ENST00000503460 968 ntBASIC14.43□□□□□ -0.1
CDH1P12830 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 RNA5SP486-201ENST00000515961 83 ntBASIC14.43□□□□□ -0.1
CDH1P12830 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH1P12830 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH1P12830 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH1P12830 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CDH1P12830 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CDH1P12830 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CDH1P12830 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDH1P12830 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDH1P12830 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CDH1P12830 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH1P12830 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDH1P12830 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH1P12830 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH1P12830 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH1P12830 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH1P12830 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH1P12830 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH1P12830 AL138725.1-201ENST00000407347 1314 ntBASIC14.42□□□□□ -0.1
CDH1P12830 FKBP4P6-201ENST00000457486 1332 ntBASIC14.42□□□□□ -0.1
CDH1P12830 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH1P12830 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH1P12830 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH1P12830 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDH1P12830 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH1P12830 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH1P12830 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH1P12830 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH1P12830 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH1P12830 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH1P12830 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH1P12830 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms