Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC1P02654 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.16□□□□□ -0.3
APOC1P02654 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
APOC1P02654 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 LRRC59-203ENST00000576448 1531 ntBASIC13.16□□□□□ -0.3
APOC1P02654 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
APOC1P02654 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC1P02654 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.16□□□□□ -0.3
APOC1P02654 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APOC1P02654 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 AC131902.2-201ENST00000566892 2172 ntBASIC13.15□□□□□ -0.3
APOC1P02654 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC1P02654 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 AC005562.1-201ENST00000583030 3219 ntBASIC13.15□□□□□ -0.3
APOC1P02654 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
APOC1P02654 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC1P02654 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 AC055811.4-201ENST00000624039 1754 ntBASIC13.15□□□□□ -0.3
APOC1P02654 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
APOC1P02654 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.15□□□□□ -0.3
APOC1P02654 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
APOC1P02654 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 FAM207CP-201ENST00000443486 507 ntBASIC13.15□□□□□ -0.3
APOC1P02654 GNAQP1-201ENST00000444815 1067 ntBASIC13.15□□□□□ -0.3
APOC1P02654 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.15□□□□□ -0.3
APOC1P02654 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.15□□□□□ -0.3
APOC1P02654 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.15□□□□□ -0.3
APOC1P02654 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.15□□□□□ -0.3
APOC1P02654 AC124283.3-201ENST00000570869 594 ntBASIC13.15□□□□□ -0.3
APOC1P02654 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
APOC1P02654 AC008761.3-201ENST00000624803 892 ntBASIC13.15□□□□□ -0.3
APOC1P02654 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC1P02654 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC1P02654 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.15□□□□□ -0.3
APOC1P02654 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC1P02654 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC1P02654 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
APOC1P02654 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
APOC1P02654 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 AC023090.2-201ENST00000625182 2110 ntBASIC13.15□□□□□ -0.3
APOC1P02654 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC1P02654 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
APOC1P02654 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.15□□□□□ -0.31
APOC1P02654 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
APOC1P02654 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.15□□□□□ -0.31
APOC1P02654 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms