Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KRT6AP02538 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
KRT6AP02538 AC131212.3-201ENST00000624087 4219 ntBASIC14.36□□□□□ -0.11
KRT6AP02538 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6AP02538 MYADML-201ENST00000474610 2147 ntBASIC14.36□□□□□ -0.11
KRT6AP02538 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
KRT6AP02538 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
KRT6AP02538 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.36□□□□□ -0.11
KRT6AP02538 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
KRT6AP02538 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6AP02538 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
KRT6AP02538 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6AP02538 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6AP02538 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.36□□□□□ -0.11
KRT6AP02538 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6AP02538 RN7SL204P-201ENST00000582831 262 ntBASIC14.36□□□□□ -0.11
KRT6AP02538 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
KRT6AP02538 AL033527.5-201ENST00000641382 801 ntBASIC14.36□□□□□ -0.11
KRT6AP02538 AL731571.1-201ENST00000617058 5428 ntBASIC14.36□□□□□ -0.11
KRT6AP02538 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6AP02538 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
KRT6AP02538 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.36□□□□□ -0.11
KRT6AP02538 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
KRT6AP02538 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 AC005840.4-201ENST00000541242 2494 ntBASIC14.36□□□□□ -0.11
KRT6AP02538 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.36□□□□□ -0.11
KRT6AP02538 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6AP02538 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
KRT6AP02538 AC092053.3-201ENST00000641308 4975 ntBASIC14.35□□□□□ -0.11
KRT6AP02538 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.35□□□□□ -0.11
KRT6AP02538 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
KRT6AP02538 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
KRT6AP02538 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.35□□□□□ -0.11
KRT6AP02538 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
KRT6AP02538 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
KRT6AP02538 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.35□□□□□ -0.11
KRT6AP02538 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.35□□□□□ -0.11
KRT6AP02538 AC245100.3-201ENST00000441281 285 ntBASIC14.35□□□□□ -0.11
KRT6AP02538 BCRP1-201ENST00000444246 691 ntBASIC14.35□□□□□ -0.11
KRT6AP02538 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.35□□□□□ -0.11
KRT6AP02538 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.35□□□□□ -0.11
KRT6AP02538 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.35□□□□□ -0.11
KRT6AP02538 AC138761.1-201ENST00000584393 385 ntBASIC14.35□□□□□ -0.11
KRT6AP02538 AC004466.1-201ENST00000599515 1080 ntBASIC14.35□□□□□ -0.11
KRT6AP02538 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.35□□□□□ -0.11
KRT6AP02538 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.35□□□□□ -0.11
KRT6AP02538 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
KRT6AP02538 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 AC107918.4-201ENST00000641966 3141 ntBASIC14.35□□□□□ -0.11
KRT6AP02538 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.35□□□□□ -0.11
KRT6AP02538 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
KRT6AP02538 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KRT6AP02538 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms