Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 PMS2P2-201ENST00000425039 1128 ntBASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AL442647.2-201ENST00000429864 857 ntBASIC13.34□□□□□ -0.27
HLA-DQA2P01906 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AC123567.1-201ENST00000548294 1261 ntBASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AC133539.2-201ENST00000604757 467 ntBASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AC004233.3-201ENST00000607794 1269 ntBASIC13.34□□□□□ -0.27
HLA-DQA2P01906 GPALPP1-207ENST00000611650 899 ntBASIC13.34□□□□□ -0.27
HLA-DQA2P01906 AC008761.3-201ENST00000624803 892 ntBASIC13.34□□□□□ -0.27
HLA-DQA2P01906 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DQA2P01906 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.33□□□□□ -0.27
HLA-DQA2P01906 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DQA2P01906 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DQA2P01906 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-DQA2P01906 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.27
HLA-DQA2P01906 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 KRT8P22-201ENST00000562317 1415 ntBASIC13.33□□□□□ -0.28
HLA-DQA2P01906 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 AL359711.2-201ENST00000563105 872 ntBASIC13.33□□□□□ -0.28
HLA-DQA2P01906 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 AC099568.2-201ENST00000609194 695 ntBASIC13.33□□□□□ -0.28
HLA-DQA2P01906 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 PRSS30P-206ENST00000641773 873 ntBASIC13.33□□□□□ -0.28
HLA-DQA2P01906 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 AC007541.1-201ENST00000570282 1469 ntBASIC13.33□□□□□ -0.28
HLA-DQA2P01906 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 AC006504.5-208ENST00000588784 2401 ntBASIC13.33□□□□□ -0.28
HLA-DQA2P01906 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 HSPA7-201ENST00000445535 1927 ntBASIC13.33□□□□□ -0.28
HLA-DQA2P01906 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DQA2P01906 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms