Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TCAM1P-207ENST00000485295 1537 ntBASIC14.01□□□□□ -0.17
SCN2BO60939 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SCN2BO60939 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.01□□□□□ -0.17
SCN2BO60939 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.01□□□□□ -0.17
SCN2BO60939 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SCN2BO60939 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SCN2BO60939 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.01□□□□□ -0.17
SCN2BO60939 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SCN2BO60939 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.01□□□□□ -0.17
SCN2BO60939 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SCN2BO60939 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.01□□□□□ -0.17
SCN2BO60939 FAM207CP-201ENST00000443486 507 ntBASIC14.01□□□□□ -0.17
SCN2BO60939 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.01□□□□□ -0.17
SCN2BO60939 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.01□□□□□ -0.17
SCN2BO60939 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 KRT18P25-201ENST00000508931 1278 ntBASIC14.01□□□□□ -0.17
SCN2BO60939 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.01□□□□□ -0.17
SCN2BO60939 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.01□□□□□ -0.17
SCN2BO60939 BX088702.1-201ENST00000610784 235 ntBASIC14.01□□□□□ -0.17
SCN2BO60939 RPSAP52-203ENST00000622976 1023 ntBASIC14.01□□□□□ -0.17
SCN2BO60939 CU634019.7-201ENST00000624153 1185 ntBASIC14.01□□□□□ -0.17
SCN2BO60939 FP236241.2-201ENST00000624906 1185 ntBASIC14.01□□□□□ -0.17
SCN2BO60939 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 AC139712.1-201ENST00000378256 1875 ntBASIC14.01□□□□□ -0.17
SCN2BO60939 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.01□□□□□ -0.17
SCN2BO60939 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.01□□□□□ -0.17
SCN2BO60939 KHSRPP1-201ENST00000427983 1768 ntBASIC14.01□□□□□ -0.17
SCN2BO60939 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14□□□□□ -0.17
SCN2BO60939 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14□□□□□ -0.17
SCN2BO60939 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 AC020910.5-201ENST00000623668 1865 ntBASIC14□□□□□ -0.17
SCN2BO60939 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14□□□□□ -0.17
SCN2BO60939 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14□□□□□ -0.17
SCN2BO60939 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 AL162726.2-201ENST00000438986 1017 ntBASIC14□□□□□ -0.17
SCN2BO60939 TMEM198B-204ENST00000484016 896 ntBASIC14□□□□□ -0.17
SCN2BO60939 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14□□□□□ -0.17
SCN2BO60939 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14□□□□□ -0.17
SCN2BO60939 AC008494.3-201ENST00000606615 944 ntBASIC14□□□□□ -0.17
SCN2BO60939 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14□□□□□ -0.17
SCN2BO60939 ABBA01031660.1-201ENST00000635219 756 ntBASIC14□□□□□ -0.17
SCN2BO60939 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14□□□□□ -0.17
SCN2BO60939 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SCN2BO60939 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SCN2BO60939 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCN2BO60939 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SCN2BO60939 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14□□□□□ -0.17
SCN2BO60939 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCN2BO60939 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms