Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.5■□□□□ 0.07
OPHN1O60890 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
OPHN1O60890 DUX4L45-201ENST00000566406 1057 ntBASIC15.5■□□□□ 0.07
OPHN1O60890 AL118558.3-201ENST00000607414 1079 ntBASIC15.5■□□□□ 0.07
OPHN1O60890 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
OPHN1O60890 AL354718.3-201ENST00000616414 581 ntBASIC15.5■□□□□ 0.07
OPHN1O60890 CR382287.1-201ENST00000623954 586 ntBASIC15.5■□□□□ 0.07
OPHN1O60890 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.5■□□□□ 0.07
OPHN1O60890 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
OPHN1O60890 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
OPHN1O60890 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
OPHN1O60890 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
OPHN1O60890 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
OPHN1O60890 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.49■□□□□ 0.07
OPHN1O60890 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.49■□□□□ 0.07
OPHN1O60890 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
OPHN1O60890 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
OPHN1O60890 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.49■□□□□ 0.07
OPHN1O60890 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.49■□□□□ 0.07
OPHN1O60890 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
OPHN1O60890 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
OPHN1O60890 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.49■□□□□ 0.07
OPHN1O60890 ELK2AP-201ENST00000392510 1007 ntBASIC15.49■□□□□ 0.07
OPHN1O60890 AL139094.1-201ENST00000405549 1188 ntBASIC15.49■□□□□ 0.07
OPHN1O60890 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.49■□□□□ 0.07
OPHN1O60890 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 AC026954.1-201ENST00000429771 1293 ntBASIC15.49■□□□□ 0.07
OPHN1O60890 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.49■□□□□ 0.07
OPHN1O60890 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.49■□□□□ 0.07
OPHN1O60890 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
OPHN1O60890 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.49■□□□□ 0.07
OPHN1O60890 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.49■□□□□ 0.07
OPHN1O60890 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.49■□□□□ 0.07
OPHN1O60890 CLUHP6-201ENST00000580789 941 ntBASIC15.49■□□□□ 0.07
OPHN1O60890 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.49■□□□□ 0.07
OPHN1O60890 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.49■□□□□ 0.07
OPHN1O60890 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.49■□□□□ 0.07
OPHN1O60890 AL022328.3-201ENST00000607943 679 ntBASIC15.49■□□□□ 0.07
OPHN1O60890 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.49■□□□□ 0.07
OPHN1O60890 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.49■□□□□ 0.07
OPHN1O60890 AC005912.2-201ENST00000619492 2400 ntBASIC15.49■□□□□ 0.07
OPHN1O60890 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
OPHN1O60890 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
OPHN1O60890 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.49■□□□□ 0.07
OPHN1O60890 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.49■□□□□ 0.07
OPHN1O60890 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
OPHN1O60890 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.49■□□□□ 0.07
OPHN1O60890 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPHN1O60890 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
OPHN1O60890 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.48■□□□□ 0.07
OPHN1O60890 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.48■□□□□ 0.07
OPHN1O60890 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.48■□□□□ 0.07
OPHN1O60890 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
OPHN1O60890 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.48■□□□□ 0.07
OPHN1O60890 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.48■□□□□ 0.07
OPHN1O60890 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms