Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
SMAD6O43541 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SMAD6O43541 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.83□□□□□ -0.04
SMAD6O43541 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
SMAD6O43541 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SMAD6O43541 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.83□□□□□ -0.04
SMAD6O43541 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.83□□□□□ -0.04
SMAD6O43541 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMAD6O43541 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SMAD6O43541 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 AL390755.1-201ENST00000623716 2027 ntBASIC14.82□□□□□ -0.04
SMAD6O43541 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SMAD6O43541 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SMAD6O43541 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 ACTG1P2-201ENST00000415776 1125 ntBASIC14.82□□□□□ -0.04
SMAD6O43541 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.82□□□□□ -0.04
SMAD6O43541 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.82□□□□□ -0.04
SMAD6O43541 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 ACTG1P11-201ENST00000425411 1125 ntBASIC14.82□□□□□ -0.04
SMAD6O43541 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.82□□□□□ -0.04
SMAD6O43541 AC022447.6-201ENST00000515522 438 ntBASIC14.82□□□□□ -0.04
SMAD6O43541 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.82□□□□□ -0.04
SMAD6O43541 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.82□□□□□ -0.04
SMAD6O43541 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.82□□□□□ -0.04
SMAD6O43541 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.82□□□□□ -0.04
SMAD6O43541 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.82□□□□□ -0.04
SMAD6O43541 AC133540.1-201ENST00000620845 1019 ntBASIC14.82□□□□□ -0.04
SMAD6O43541 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
SMAD6O43541 AL805961.1-203ENST00000641078 1258 ntBASIC14.82□□□□□ -0.04
SMAD6O43541 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
SMAD6O43541 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.82□□□□□ -0.04
SMAD6O43541 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMAD6O43541 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.82□□□□□ -0.04
SMAD6O43541 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMAD6O43541 LINC00552-201ENST00000625151 2579 ntBASIC14.81□□□□□ -0.04
SMAD6O43541 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SMAD6O43541 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMAD6O43541 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMAD6O43541 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMAD6O43541 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMAD6O43541 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMAD6O43541 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.81□□□□□ -0.04
SMAD6O43541 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMAD6O43541 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SMAD6O43541 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMAD6O43541 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
SMAD6O43541 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMAD6O43541 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMAD6O43541 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.81□□□□□ -0.04
SMAD6O43541 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMAD6O43541 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.81□□□□□ -0.04
SMAD6O43541 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMAD6O43541 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMAD6O43541 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMAD6O43541 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms