Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AL390755.1-201ENST00000623716 2027 ntBASIC15.51■□□□□ 0.07
CLDN5O00501 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.51■□□□□ 0.07
CLDN5O00501 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 AC144522.1-201ENST00000625111 1658 ntBASIC15.51■□□□□ 0.07
CLDN5O00501 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN5O00501 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLDN5O00501 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CLDN5O00501 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN5O00501 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLDN5O00501 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CLDN5O00501 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 BX284668.4-201ENST00000453917 508 ntBASIC15.5■□□□□ 0.07
CLDN5O00501 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CLDN5O00501 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.5■□□□□ 0.07
CLDN5O00501 AC022447.6-201ENST00000515522 438 ntBASIC15.5■□□□□ 0.07
CLDN5O00501 SCARNA20.5-201ENST00000516991 142 ntBASIC15.5■□□□□ 0.07
CLDN5O00501 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.5■□□□□ 0.07
CLDN5O00501 RBM8B-201ENST00000555532 525 ntBASIC15.5■□□□□ 0.07
CLDN5O00501 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.5■□□□□ 0.07
CLDN5O00501 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.5■□□□□ 0.07
CLDN5O00501 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 AC138649.2-201ENST00000615886 705 ntBASIC15.5■□□□□ 0.07
CLDN5O00501 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.5■□□□□ 0.07
CLDN5O00501 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN5O00501 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CLDN5O00501 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN5O00501 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN5O00501 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN5O00501 FAM90A7P-201ENST00000382628 1395 ntBASIC15.49■□□□□ 0.07
CLDN5O00501 FAM90A23P-201ENST00000400136 1395 ntBASIC15.49■□□□□ 0.07
CLDN5O00501 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN5O00501 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN5O00501 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLDN5O00501 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN5O00501 MYADML-201ENST00000474610 2147 ntBASIC15.49■□□□□ 0.07
CLDN5O00501 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN5O00501 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 AC138028.6-201ENST00000616106 1482 ntBASIC15.49■□□□□ 0.07
CLDN5O00501 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
CLDN5O00501 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN5O00501 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN5O00501 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN5O00501 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN5O00501 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms