Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 KRT8P22-201ENST00000562317 1415 ntBASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 HIF3A-205ENST00000377670 5852 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 TNC-211ENST00000537320 4946 ntTSL 5 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 EIF5B-205ENST00000617677 4698 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 AL158047.1-201ENST00000445918 881 ntBASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 NUS1P1-201ENST00000446295 882 ntBASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 AC116562.2-201ENST00000507042 360 ntBASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 NAA38-203ENST00000575071 553 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 MIR4492-201ENST00000581627 80 ntBASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 GPR32P1-201ENST00000601788 811 ntBASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 AC010653.2-201ENST00000623505 997 ntBASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 ADAMTSL3-201ENST00000286744 7336 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 PBX1-212ENST00000540236 6175 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 AC012508.2-201ENST00000567613 1472 ntBASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 LAMC2-201ENST00000264144 5147 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 STYX-201ENST00000354586 4857 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 ABCC11-204ENST00000394748 4576 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
CHKB-CPT1BH3BT56 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms