Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 LINC01101-201ENST00000622953 1884 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 INE2-201ENST00000630399 1874 ntBASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA3F8WFD2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 AP000593.2-201ENST00000542775 1433 ntBASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 ST20-AS1-201ENST00000560255 4223 ntBASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 AC020910.5-201ENST00000623668 1865 ntBASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 AL354877.1-201ENST00000424412 413 ntBASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 AL021578.1-201ENST00000613646 709 ntBASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA3F8WFD2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 NDUFV2P1-201ENST00000596415 907 ntBASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 AC138649.2-201ENST00000615886 705 ntBASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 AC103702.1-201ENST00000548801 2630 ntBASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA3F8WFD2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA3F8WFD2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA3F8WFD2 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA3F8WFD2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA3F8WFD2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA3F8WFD2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA3F8WFD2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms