Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 KRT8P21-201ENST00000430398 1491 ntBASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 HINT2P1-201ENST00000419438 481 ntBASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 EEF1DP6-201ENST00000449232 372 ntBASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 RTN3P1-201ENST00000536295 711 ntBASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 AL133499.1-201ENST00000596207 608 ntBASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 AC012044.1-201ENST00000603431 297 ntBASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 AL353770.1-201ENST00000614915 403 ntBASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 AC133540.1-201ENST00000620845 1019 ntBASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TBC1D3FA6NER0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 AF254983.2-201ENST00000612331 135 ntBASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 AGAP7P-201ENST00000582299 2062 ntBASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 AGAP14-201ENST00000624701 2060 ntBASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TBC1D3FA6NER0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
TBC1D3FA6NER0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.65□□□□□ -0.07
TBC1D3FA6NER0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.64□□□□□ -0.07
TBC1D3FA6NER0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms