Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RNU1-114P-201ENST00000365297 166 ntBASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CNN2P8-201ENST00000421872 913 ntBASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TPT1P11-201ENST00000458482 498 ntBASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MIR4525-201ENST00000580000 75 ntBASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GNRHR2-203ENST00000581100 1187 ntBASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC008687.7-202ENST00000637404 953 ntBASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.93□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AHCYP2-201ENST00000430630 1300 ntBASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC041040.2-201ENST00000622926 2899 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms