Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
A0A1W2PRF3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
A0A1W2PRF3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
A0A1W2PRF3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.22□□□□□ -0.45
A0A1W2PRF3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
A0A1W2PRF3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
A0A1W2PRF3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.22□□□□□ -0.45
A0A1W2PRF3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
A0A1W2PRF3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.22□□□□□ -0.45
A0A1W2PRF3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
A0A1W2PRF3 AC011840.2-201ENST00000563063 1520 ntBASIC12.21□□□□□ -0.45
A0A1W2PRF3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 AC104581.4-201ENST00000623126 3052 ntBASIC12.21□□□□□ -0.45
A0A1W2PRF3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 ACTBP11-201ENST00000436287 1126 ntBASIC12.21□□□□□ -0.45
A0A1W2PRF3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 Z93015.1-201ENST00000451718 390 ntBASIC12.21□□□□□ -0.45
A0A1W2PRF3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 AP003171.2-201ENST00000528208 925 ntBASIC12.21□□□□□ -0.45
A0A1W2PRF3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 AC073413.1-201ENST00000603927 732 ntBASIC12.21□□□□□ -0.45
A0A1W2PRF3 GPR182-203ENST00000622922 591 ntBASIC12.21□□□□□ -0.45
A0A1W2PRF3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.21□□□□□ -0.45
A0A1W2PRF3 AC009093.2-202ENST00000620513 2079 ntBASIC12.21□□□□□ -0.45
A0A1W2PRF3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
A0A1W2PRF3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
A0A1W2PRF3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.21□□□□□ -0.46
A0A1W2PRF3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.21□□□□□ -0.46
A0A1W2PRF3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.21□□□□□ -0.46
A0A1W2PRF3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
A0A1W2PRF3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
A0A1W2PRF3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.21□□□□□ -0.46
A0A1W2PRF3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.21□□□□□ -0.46
A0A1W2PRF3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
A0A1W2PRF3 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
A0A1W2PRF3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
A0A1W2PRF3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 SALL4P5-201ENST00000419001 1760 ntBASIC12.2□□□□□ -0.46
A0A1W2PRF3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
A0A1W2PRF3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms