Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 C1QBPP1-201ENST00000400117 770 ntBASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 AP005482.1-201ENST00000563722 1273 ntBASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX49Q9Y6V7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.83■□□□□ 0.45
DDX49Q9Y6V7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
DDX49Q9Y6V7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 CICP8-201ENST00000455800 2813 ntBASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms