Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 AC092896.1-201ENST00000465850 380 ntBASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 RN7SL128P-201ENST00000467883 305 ntBASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 AC005274.1-201ENST00000623460 802 ntBASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42BPBQ9Y5S2 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 RPS18P9-201ENST00000482817 460 ntBASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 RN7SL288P-201ENST00000490496 291 ntBASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 OR7E115P-201ENST00000382617 1024 ntBASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 AC092903.1-201ENST00000466506 262 ntBASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 ENPP7P8-202ENST00000527856 1345 ntBASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 AC126755.5-201ENST00000622756 267 ntBASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 PLS3-210ENST00000626746 216 ntTSL 4 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC21.49■■□□□ 1.03
CDC42BPBQ9Y5S2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 ZNF877P-201ENST00000437614 612 ntBASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 GOLGA6L16P-201ENST00000441780 1299 ntBASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 BATF-202ENST00000555504 361 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 AL049840.2-201ENST00000602722 535 ntBASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC21.48■■□□□ 1.03
CDC42BPBQ9Y5S2 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42BPBQ9Y5S2 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC21.47■■□□□ 1.03
CDC42BPBQ9Y5S2 KNOP1P1-201ENST00000542108 989 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms