Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 AC004945.1-201ENST00000416738 983 ntBASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 MED15P5-201ENST00000423150 992 ntBASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 AL079307.3-201ENST00000556114 283 ntBASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 SLC25A6P4-201ENST00000586535 553 ntBASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 AC025048.3-201ENST00000590609 569 ntBASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 FAM197Y3-203ENST00000618346 717 ntBASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 AC005702.4-201ENST00000618393 416 ntBASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 AL157414.3-201ENST00000624276 1954 ntBASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
KCNIP3Q9Y2W7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 YBX2P1-201ENST00000394192 760 ntBASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 RPL13P2-201ENST00000440687 659 ntBASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 AL033527.5-202ENST00000641632 1098 ntBASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.42□□□□□ -0.42
KCNIP3Q9Y2W7 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms