Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 IGHJ2P-201ENST00000454480 60 ntBASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 AC008805.1-201ENST00000590892 364 ntBASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 AC026740.1-201ENST00000607068 791 ntBASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 AP000346.4-201ENST00000614827 381 ntBASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 AL009178.2-201ENST00000597278 2719 ntBASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 AC006504.5-208ENST00000588784 2401 ntBASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20BQ9P0W2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 TMBIM7P-202ENST00000641474 1516 ntBASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 AL354702.1-201ENST00000442006 1960 ntBASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 RN7SL774P-201ENST00000577467 290 ntBASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 AC009884.2-201ENST00000603110 324 ntBASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 AL021578.1-201ENST00000613646 709 ntBASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 AC005089.1-201ENST00000619486 2241 ntBASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 KRT8P28-201ENST00000433288 1390 ntBASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.88■□□□□ 0.45
HMG20BQ9P0W2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 CYP4F23P-201ENST00000593402 1579 ntBASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 AC139712.1-201ENST00000378256 1875 ntBASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMG20BQ9P0W2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms