Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 CETN4P-206ENST00000642099 2168 ntBASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 AC087499.6-201ENST00000411576 835 ntBASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 TOMM22P5-201ENST00000416399 439 ntBASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 AC092658.1-201ENST00000505836 891 ntBASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 AC135586.1-201ENST00000539323 574 ntBASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 AL589739.1-201ENST00000607720 493 ntBASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 AL122018.1-201ENST00000446607 2310 ntBASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCM2LQ9NUG4 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 RN7SL832P-201ENST00000607781 1756 ntBASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 RPL13P2-201ENST00000440687 659 ntBASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 AL844908.2-201ENST00000609461 460 ntBASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 AC005562.1-201ENST00000583030 3219 ntBASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCM2LQ9NUG4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms