Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 AC136604.1-202ENST00000425471 771 ntBASIC14.63□□□□□ -0.07
SSU72Q9NP77 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 AC092580.3-201ENST00000430932 139 ntBASIC14.63□□□□□ -0.07
SSU72Q9NP77 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 AC125807.1-201ENST00000483097 614 ntBASIC14.63□□□□□ -0.07
SSU72Q9NP77 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 MIR3687-2-201ENST00000577708 61 ntBASIC14.63□□□□□ -0.07
SSU72Q9NP77 AC015911.4-201ENST00000588022 1070 ntBASIC14.63□□□□□ -0.07
SSU72Q9NP77 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 AL158211.3-201ENST00000607385 239 ntBASIC14.63□□□□□ -0.07
SSU72Q9NP77 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 MIR3687-1-201ENST00000614492 61 ntBASIC14.63□□□□□ -0.07
SSU72Q9NP77 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 AL590560.3-201ENST00000623350 461 ntBASIC14.63□□□□□ -0.07
SSU72Q9NP77 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 AC100757.3-201ENST00000622361 1406 ntBASIC14.63□□□□□ -0.07
SSU72Q9NP77 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 AC009474.1-201ENST00000455096 1565 ntBASIC14.63□□□□□ -0.07
SSU72Q9NP77 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SSU72Q9NP77 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSU72Q9NP77 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSU72Q9NP77 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSU72Q9NP77 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSU72Q9NP77 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSU72Q9NP77 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSU72Q9NP77 USP17L6P-201ENST00000382470 1197 ntBASIC14.62□□□□□ -0.07
SSU72Q9NP77 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.62□□□□□ -0.07
SSU72Q9NP77 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 KLF2P3-201ENST00000451977 1087 ntBASIC14.62□□□□□ -0.07
SSU72Q9NP77 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.62□□□□□ -0.07
SSU72Q9NP77 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 AC120045.2-201ENST00000567334 178 ntBASIC14.62□□□□□ -0.07
SSU72Q9NP77 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSU72Q9NP77 AC104506.1-201ENST00000609247 429 ntBASIC14.62□□□□□ -0.07
SSU72Q9NP77 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSU72Q9NP77 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SSU72Q9NP77 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms