Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 OR52X1P-201ENST00000446117 914 ntBASIC13.33□□□□□ -0.28
CHD8Q9HCK8 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.33□□□□□ -0.28
CHD8Q9HCK8 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 AC145285.5-201ENST00000562217 361 ntBASIC13.33□□□□□ -0.28
CHD8Q9HCK8 MIR6749-201ENST00000617008 69 ntBASIC13.33□□□□□ -0.28
CHD8Q9HCK8 MIR6741-201ENST00000618782 63 ntBASIC13.33□□□□□ -0.28
CHD8Q9HCK8 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 AC103702.1-201ENST00000548801 2630 ntBASIC13.33□□□□□ -0.28
CHD8Q9HCK8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 LINC00554-201ENST00000564841 3011 ntBASIC13.33□□□□□ -0.28
CHD8Q9HCK8 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.33□□□□□ -0.28
CHD8Q9HCK8 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 ALMS1P1-201ENST00000428767 921 ntBASIC13.32□□□□□ -0.28
CHD8Q9HCK8 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 AC069421.1-201ENST00000447462 323 ntBASIC13.32□□□□□ -0.28
CHD8Q9HCK8 AC104117.4-201ENST00000521486 847 ntBASIC13.32□□□□□ -0.28
CHD8Q9HCK8 RPL10P8-201ENST00000522888 313 ntBASIC13.32□□□□□ -0.28
CHD8Q9HCK8 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.32□□□□□ -0.28
CHD8Q9HCK8 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 AC048382.6-201ENST00000621980 1223 ntBASIC13.32□□□□□ -0.28
CHD8Q9HCK8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 LINC01101-201ENST00000622953 1884 ntBASIC13.32□□□□□ -0.28
CHD8Q9HCK8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 AC069224.1-201ENST00000566372 1715 ntBASIC13.32□□□□□ -0.28
CHD8Q9HCK8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.32□□□□□ -0.28
CHD8Q9HCK8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 ALDOAP1-201ENST00000491506 1078 ntBASIC13.32□□□□□ -0.28
CHD8Q9HCK8 RN7SL480P-201ENST00000581481 294 ntBASIC13.32□□□□□ -0.28
CHD8Q9HCK8 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 PAX6-247ENST00000638965 979 ntTSL 5 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.32□□□□□ -0.28
CHD8Q9HCK8 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 KRT8P28-201ENST00000433288 1390 ntBASIC13.31□□□□□ -0.28
CHD8Q9HCK8 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AL136084.1-201ENST00000449172 318 ntBASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AC092903.1-201ENST00000466506 262 ntBASIC13.31□□□□□ -0.28
CHD8Q9HCK8 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 AC022532.1-201ENST00000624563 1728 ntBASIC13.31□□□□□ -0.28
CHD8Q9HCK8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHD8Q9HCK8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms