Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 AC100757.3-201ENST00000622361 1406 ntBASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 FO393414.2-201ENST00000405153 598 ntBASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 AL035633.1-201ENST00000406139 838 ntBASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 TERF1P3-201ENST00000505638 1227 ntBASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 AC105021.1-202ENST00000570572 669 ntBASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 AL589739.1-201ENST00000607720 493 ntBASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 AL138828.2-201ENST00000615812 383 ntBASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 CETN4P-206ENST00000642099 2168 ntBASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 COX20P2-201ENST00000452636 358 ntBASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 RN7SL828P-201ENST00000607615 303 ntBASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 AL590560.3-201ENST00000623350 461 ntBASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.34□□□□□ -0.11
KLHL4Q9C0H6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.33□□□□□ -0.11
KLHL4Q9C0H6 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms