Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTFDC1Q9BY42 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 AC093909.3-201ENST00000504783 336 ntBASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 DNM1P51-201ENST00000558149 522 ntBASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 AC011247.3-201ENST00000603297 438 ntBASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 TEKT4P2-202ENST00000559466 1312 ntBASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTFDC1Q9BY42 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 AL135901.1-201ENST00000451812 333 ntBASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 AC093826.1-201ENST00000508655 993 ntBASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 AC140658.4-201ENST00000561990 352 ntBASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.6■□□□□ 0.41
RTFDC1Q9BY42 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms