Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL136301.1-201ENST00000615830 422 ntBASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 AP001002.3-201ENST00000623482 206 ntBASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 AC020907.1-201ENST00000616460 1350 ntBASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 AC005089.1-201ENST00000619486 2241 ntBASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 AC020910.5-201ENST00000623668 1865 ntBASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AL138725.1-201ENST00000407347 1314 ntBASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 MIR663B-201ENST00000408361 115 ntBASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AC006033.1-201ENST00000440505 426 ntBASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 MIR4683-201ENST00000579659 81 ntBASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AC003102.2-201ENST00000589195 1469 ntBASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 INE2-201ENST00000630399 1874 ntBASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SSBP3Q9BWW4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 ACE3P-201ENST00000423435 1973 ntBASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 RN7SKP230-201ENST00000365642 335 ntBASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 POM121L10P-201ENST00000436994 1285 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms