Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 FUCA1P1-201ENST00000374476 1351 ntBASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CSMD1Q96PZ7 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 OR2R1P-201ENST00000441404 914 ntBASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 AP003040.1-201ENST00000532044 1024 ntBASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 AC023968.2-201ENST00000560593 1049 ntBASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 RPL4P6-201ENST00000438116 1304 ntBASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 AC003686.1-201ENST00000550956 1034 ntBASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 MIR4746-201ENST00000579802 71 ntBASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 AL118522.1-201ENST00000611368 560 ntBASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 FKBP4P8-201ENST00000610931 1369 ntBASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CSMD1Q96PZ7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 AC022966.2-201ENST00000587434 367 ntBASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 AC027601.3-201ENST00000622907 509 ntBASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CSMD1Q96PZ7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms