Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NSMCE2Q96MF7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14□□□□□ -0.17
NSMCE2Q96MF7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NSMCE2Q96MF7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14□□□□□ -0.17
NSMCE2Q96MF7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14□□□□□ -0.17
NSMCE2Q96MF7 MIR4469-201ENST00000583919 79 ntBASIC14□□□□□ -0.17
NSMCE2Q96MF7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14□□□□□ -0.17
NSMCE2Q96MF7 AL158212.4-201ENST00000624062 1286 ntBASIC14□□□□□ -0.17
NSMCE2Q96MF7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14□□□□□ -0.17
NSMCE2Q96MF7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NSMCE2Q96MF7 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14□□□□□ -0.17
NSMCE2Q96MF7 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14□□□□□ -0.17
NSMCE2Q96MF7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NSMCE2Q96MF7 AL138799.1-201ENST00000448213 1675 ntBASIC14□□□□□ -0.17
NSMCE2Q96MF7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NSMCE2Q96MF7 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NSMCE2Q96MF7 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NSMCE2Q96MF7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NSMCE2Q96MF7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NSMCE2Q96MF7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NSMCE2Q96MF7 AC090643.2-201ENST00000623442 2029 ntBASIC14□□□□□ -0.17
NSMCE2Q96MF7 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
NSMCE2Q96MF7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NSMCE2Q96MF7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14□□□□□ -0.17
NSMCE2Q96MF7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14□□□□□ -0.17
NSMCE2Q96MF7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 AL136172.1-201ENST00000598590 1394 ntBASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 HSPA8P5-201ENST00000456928 2069 ntBASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 AL138828.2-201ENST00000615812 383 ntBASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 AC015909.5-201ENST00000624336 2266 ntBASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 AL591122.2-201ENST00000624125 1853 ntBASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.99□□□□□ -0.17
NSMCE2Q96MF7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 AC011498.7-201ENST00000624986 2027 ntBASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms