Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MIR663B-201ENST00000408361 115 ntBASIC14.02□□□□□ -0.17
TM9SF4Q92544 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.02□□□□□ -0.17
TM9SF4Q92544 COX5BP1-201ENST00000507622 393 ntBASIC14.02□□□□□ -0.17
TM9SF4Q92544 AC126915.1-201ENST00000522847 1038 ntBASIC14.02□□□□□ -0.17
TM9SF4Q92544 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TM9SF4Q92544 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TM9SF4Q92544 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.02□□□□□ -0.17
TM9SF4Q92544 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.02□□□□□ -0.17
TM9SF4Q92544 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TM9SF4Q92544 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TM9SF4Q92544 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TM9SF4Q92544 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TM9SF4Q92544 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TM9SF4Q92544 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TM9SF4Q92544 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.02□□□□□ -0.17
TM9SF4Q92544 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.02□□□□□ -0.17
TM9SF4Q92544 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TM9SF4Q92544 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TM9SF4Q92544 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
TM9SF4Q92544 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 AL662890.1-201ENST00000396818 632 ntBASIC14.01□□□□□ -0.17
TM9SF4Q92544 RPL5P21-201ENST00000404620 815 ntBASIC14.01□□□□□ -0.17
TM9SF4Q92544 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 IGHJ2P-201ENST00000454480 60 ntBASIC14.01□□□□□ -0.17
TM9SF4Q92544 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 ZNF767P-206ENST00000513792 565 ntBASIC14.01□□□□□ -0.17
TM9SF4Q92544 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 ZACNP1-201ENST00000612259 710 ntBASIC14.01□□□□□ -0.17
TM9SF4Q92544 AL096828.3-201ENST00000615354 462 ntBASIC14.01□□□□□ -0.17
TM9SF4Q92544 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.01□□□□□ -0.17
TM9SF4Q92544 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TM9SF4Q92544 AL158070.2-201ENST00000623713 1621 ntBASIC14.01□□□□□ -0.17
TM9SF4Q92544 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
TM9SF4Q92544 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TM9SF4Q92544 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TM9SF4Q92544 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14□□□□□ -0.17
TM9SF4Q92544 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TM9SF4Q92544 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 ACE3P-201ENST00000423435 1973 ntBASIC14□□□□□ -0.17
TM9SF4Q92544 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
TM9SF4Q92544 AC006504.5-208ENST00000588784 2401 ntBASIC14□□□□□ -0.17
TM9SF4Q92544 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TM9SF4Q92544 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF4Q92544 OR2I1P-209ENST00000641730 5365 ntBASIC14□□□□□ -0.17
TM9SF4Q92544 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
TM9SF4Q92544 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14□□□□□ -0.17
TM9SF4Q92544 AL008707.1-201ENST00000422498 534 ntBASIC14□□□□□ -0.17
TM9SF4Q92544 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF4Q92544 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14□□□□□ -0.17
TM9SF4Q92544 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14□□□□□ -0.17
TM9SF4Q92544 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14□□□□□ -0.17
TM9SF4Q92544 HSPB1P2-201ENST00000448722 546 ntBASIC14□□□□□ -0.17
TM9SF4Q92544 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14□□□□□ -0.17
TM9SF4Q92544 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14□□□□□ -0.17
TM9SF4Q92544 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14□□□□□ -0.17
TM9SF4Q92544 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms