Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DDX1Q92499 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.68■□□□□ 0.1
DDX1Q92499 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.68■□□□□ 0.1
DDX1Q92499 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.68■□□□□ 0.1
DDX1Q92499 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DDX1Q92499 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.68■□□□□ 0.1
DDX1Q92499 CHMP1AP1-201ENST00000445563 662 ntBASIC15.68■□□□□ 0.1
DDX1Q92499 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.68■□□□□ 0.1
DDX1Q92499 ZNF767P-206ENST00000513792 565 ntBASIC15.68■□□□□ 0.1
DDX1Q92499 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 SORD2P-201ENST00000558556 1069 ntBASIC15.68■□□□□ 0.1
DDX1Q92499 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 AC016629.1-201ENST00000596579 586 ntBASIC15.68■□□□□ 0.1
DDX1Q92499 AL021578.1-201ENST00000613646 709 ntBASIC15.68■□□□□ 0.1
DDX1Q92499 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.68■□□□□ 0.1
DDX1Q92499 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
DDX1Q92499 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DDX1Q92499 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.68■□□□□ 0.1
DDX1Q92499 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.67■□□□□ 0.1
DDX1Q92499 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
DDX1Q92499 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 AL136309.1-201ENST00000403917 691 ntBASIC15.67■□□□□ 0.1
DDX1Q92499 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.67■□□□□ 0.1
DDX1Q92499 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.67■□□□□ 0.1
DDX1Q92499 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
DDX1Q92499 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.67■□□□□ 0.1
DDX1Q92499 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.67■□□□□ 0.1
DDX1Q92499 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 AL354989.2-201ENST00000435838 1540 ntBASIC15.67■□□□□ 0.1
DDX1Q92499 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.67■□□□□ 0.1
DDX1Q92499 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.67■□□□□ 0.1
DDX1Q92499 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.67■□□□□ 0.1
DDX1Q92499 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
DDX1Q92499 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.67■□□□□ 0.1
DDX1Q92499 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
DDX1Q92499 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
DDX1Q92499 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.66■□□□□ 0.1
DDX1Q92499 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.66■□□□□ 0.1
DDX1Q92499 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.66■□□□□ 0.1
DDX1Q92499 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.66■□□□□ 0.1
DDX1Q92499 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms