Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 AL157414.3-201ENST00000624276 1954 ntBASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 FAM207CP-201ENST00000443486 507 ntBASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 BCRP1-201ENST00000444246 691 ntBASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 SPTLC1P1-201ENST00000447199 261 ntBASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 AC099568.2-201ENST00000609194 695 ntBASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 SLC7A15P-201ENST00000424028 1363 ntBASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RTN4IP1Q8WWV3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 DFFBP1-201ENST00000433250 979 ntBASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 RPL13AP25-201ENST00000484130 612 ntBASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 AC004066.1-201ENST00000502488 802 ntBASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms