Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 SOCS2P1-201ENST00000417727 557 ntBASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 GNAQP1-201ENST00000444815 1067 ntBASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 AC104596.2-201ENST00000512793 793 ntBASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 AC008761.3-201ENST00000624803 892 ntBASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC44A1Q8WWI5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 AGAP10P-201ENST00000454844 2418 ntBASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 MIR770-201ENST00000390219 98 ntBASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 AC093004.1-201ENST00000508850 424 ntBASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 AC055876.2-201ENST00000531834 546 ntBASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 AC138696.2-201ENST00000607376 223 ntBASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 AL157996.1-201ENST00000624684 2299 ntBASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC44A1Q8WWI5 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC44A1Q8WWI5 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms