Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 RNA5SP406-201ENST00000516106 112 ntBASIC17.55■□□□□ 0.4
SNED1Q8TER0 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 KRT8P2-201ENST00000556193 944 ntBASIC17.55■□□□□ 0.4
SNED1Q8TER0 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 AL591122.2-201ENST00000624125 1853 ntBASIC17.55■□□□□ 0.4
SNED1Q8TER0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNED1Q8TER0 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 MIR566-201ENST00000385187 94 ntBASIC17.55■□□□□ 0.4
SNED1Q8TER0 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNED1Q8TER0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 AC104640.1-201ENST00000562617 2109 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 LAP3P2-201ENST00000454686 1454 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 AC023157.3-201ENST00000619086 2088 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 AC026470.1-201ENST00000478038 846 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 TREHP1-201ENST00000531328 465 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 KLF17P1-201ENST00000547105 1126 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 AC013553.1-201ENST00000560906 267 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 NT5C-204ENST00000578337 582 ntTSL 2 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 TRMT112P3-201ENST00000580149 358 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 AC010632.2-201ENST00000588369 1224 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 CYP4F36P-201ENST00000589193 186 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 AC010976.2-201ENST00000609697 852 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 HMGB1P24-201ENST00000611897 328 ntBASIC17.54■□□□□ 0.4
SNED1Q8TER0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNED1Q8TER0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SNED1Q8TER0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms