Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC007326.2-201ENST00000624224 7579 ntBASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 OR2I1P-210ENST00000642037 4691 ntBASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 AL354989.2-201ENST00000435838 1540 ntBASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 COX5BP1-201ENST00000507622 393 ntBASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 AP000812.2-201ENST00000538934 718 ntBASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH19Q8TAB3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 MIR1202-201ENST00000408529 83 ntBASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 C2orf69P2-201ENST00000562032 1123 ntBASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 AL358472.3-201ENST00000608147 415 ntBASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDH19Q8TAB3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 AC016397.2-201ENST00000624848 1985 ntBASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDH19Q8TAB3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms