Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 AL353637.1-201ENST00000451571 732 ntBASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 AL353770.1-201ENST00000614915 403 ntBASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.04■□□□□ 0.32
NEDD1Q8NHV4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 AC079336.7-201ENST00000623428 1078 ntBASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD1Q8NHV4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 POU5F1P2-201ENST00000521750 823 ntBASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 FGFR3P5-201ENST00000564496 886 ntBASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.02■□□□□ 0.32
NEDD1Q8NHV4 AC104506.1-201ENST00000609247 429 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms