Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRFBP1Q8NEF9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRFBP1Q8NEF9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRFBP1Q8NEF9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SRFBP1Q8NEF9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SRFBP1Q8NEF9 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.15□□□□□ -0.15
SRFBP1Q8NEF9 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
SRFBP1Q8NEF9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 AC002472.3-201ENST00000640124 621 ntBASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRFBP1Q8NEF9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 AC020910.5-201ENST00000623668 1865 ntBASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 PUDPP3-201ENST00000445368 636 ntBASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 AL355994.2-201ENST00000447882 704 ntBASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 GPR53P-205ENST00000457298 1084 ntBASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRFBP1Q8NEF9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms