Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 AP003171.2-201ENST00000528208 925 ntBASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 ENPP7P14-201ENST00000621765 1040 ntBASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 AC113367.3-201ENST00000508316 1912 ntBASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 AC126335.2-201ENST00000623362 4637 ntBASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AC136759.1-202ENST00000530858 2194 ntBASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AC112492.5-201ENST00000421897 457 ntBASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AC245100.3-201ENST00000441281 285 ntBASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AC017083.2-201ENST00000608069 979 ntBASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AL022328.1-201ENST00000610050 478 ntBASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AC011840.2-201ENST00000563063 1520 ntBASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 SALL4P5-201ENST00000419001 1760 ntBASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIMC1Q8NDZ2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIMC1Q8NDZ2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms