Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MIR3677-201ENST00000578964 60 ntBASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 AC138894.2-201ENST00000602838 371 ntBASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 AL109837.1-201ENST00000603272 613 ntBASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 AC005632.3-201ENST00000605544 308 ntBASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 YRDCP1-201ENST00000621419 643 ntBASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SYNPOQ8N3V7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.96□□□□□ -0.02
SYNPOQ8N3V7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SYNPOQ8N3V7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.96□□□□□ -0.02
SYNPOQ8N3V7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SYNPOQ8N3V7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SYNPOQ8N3V7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.96□□□□□ -0.02
SYNPOQ8N3V7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SYNPOQ8N3V7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SYNPOQ8N3V7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 RPL8P2-201ENST00000430538 502 ntBASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 AC079112.1-201ENST00000454972 939 ntBASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 CHCHD2P9-201ENST00000461726 456 ntBASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 AC093752.3-201ENST00000567343 901 ntBASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SYNPOQ8N3V7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 KRT18P9-201ENST00000604826 1300 ntBASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SYNPOQ8N3V7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms