Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 CHMP1AP1-201ENST00000445563 662 ntBASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 AC012362.1-201ENST00000434906 739 ntBASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 VDAC1P1-201ENST00000439229 848 ntBASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 AC009779.1-201ENST00000551138 283 ntBASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 AC025262.2-201ENST00000623975 1056 ntBASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 AC138466.5-201ENST00000624002 808 ntBASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RP1L1Q8IWN7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 AL627422.1-201ENST00000434104 580 ntBASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 RPL17P45-201ENST00000586289 509 ntBASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 AC105137.3-201ENST00000617588 984 ntBASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 AC051619.9-201ENST00000623237 597 ntBASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 AC005618.3-201ENST00000624928 458 ntBASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 AC013726.1-201ENST00000563747 2285 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms