Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 RNU1-114P-201ENST00000365297 166 ntBASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 MIR8072-201ENST00000614241 80 ntBASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 GPALPP1-207ENST00000611650 899 ntBASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 SLC7A15P-201ENST00000424028 1363 ntBASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC50Q8IVM0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 AC152010.1-201ENST00000415779 2006 ntBASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms