Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 MESTP3-201ENST00000503460 968 ntBASIC15.4■□□□□ 0.06
RFX6Q8HWS3 AC106760.1-201ENST00000508690 800 ntBASIC15.4■□□□□ 0.06
RFX6Q8HWS3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 AC126335.2-201ENST00000623362 4637 ntBASIC15.4■□□□□ 0.06
RFX6Q8HWS3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 FKBP4P6-201ENST00000457486 1332 ntBASIC15.4■□□□□ 0.06
RFX6Q8HWS3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 MYADML-201ENST00000474610 2147 ntBASIC15.4■□□□□ 0.06
RFX6Q8HWS3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFX6Q8HWS3 AL928921.2-201ENST00000641325 2442 ntBASIC15.39■□□□□ 0.05
RFX6Q8HWS3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 AC138696.2-201ENST00000607376 223 ntBASIC15.39■□□□□ 0.05
RFX6Q8HWS3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 AC138466.3-201ENST00000619983 221 ntBASIC15.39■□□□□ 0.05
RFX6Q8HWS3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 INE2-201ENST00000630399 1874 ntBASIC15.39■□□□□ 0.05
RFX6Q8HWS3 AC012617.1-204ENST00000586340 2305 ntBASIC15.39■□□□□ 0.05
RFX6Q8HWS3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFX6Q8HWS3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.38■□□□□ 0.05
RFX6Q8HWS3 AL355864.2-201ENST00000447420 863 ntBASIC15.38■□□□□ 0.05
RFX6Q8HWS3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms