Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATG4DQ86TL0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATG4DQ86TL0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.38□□□□□ -0.27
ATG4DQ86TL0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 SORD2P-201ENST00000558556 1069 ntBASIC13.38□□□□□ -0.27
ATG4DQ86TL0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 AC011498.7-201ENST00000624986 2027 ntBASIC13.38□□□□□ -0.27
ATG4DQ86TL0 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 AC016397.2-201ENST00000624848 1985 ntBASIC13.38□□□□□ -0.27
ATG4DQ86TL0 AL928921.2-201ENST00000641325 2442 ntBASIC13.38□□□□□ -0.27
ATG4DQ86TL0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATG4DQ86TL0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 AC020910.6-201ENST00000623084 1459 ntBASIC13.37□□□□□ -0.27
ATG4DQ86TL0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 KRT8P28-201ENST00000433288 1390 ntBASIC13.37□□□□□ -0.27
ATG4DQ86TL0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 AL136309.1-201ENST00000403917 691 ntBASIC13.37□□□□□ -0.27
ATG4DQ86TL0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 AC026954.1-201ENST00000429771 1293 ntBASIC13.37□□□□□ -0.27
ATG4DQ86TL0 RPL7P3-201ENST00000441388 714 ntBASIC13.37□□□□□ -0.27
ATG4DQ86TL0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms